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ABOUT THIS RECORD
ID:
MNEST050812
species:
Oryza sativa
source:
PMRD, original name:
osa-miRf11597-akr
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ACCGGTCTGACCGGCTGATGG
miRNA*
AAAGGGCGGTCTGACCGGGCG
mismatches:
5
bulges:
0
View larger
pre-miRNA
GACCAGCCC
AAAGGGCGGTCTGACCGGGCG
CATGCCGCCGGTCTGACCGGGTGCATGTC
ACCGGTCTGACCGGCTGATGG
CCGGTGGTC
dot-bracket secondary structure
(((((.(((
(..((.(((((.((((((..(
((((((.((((.....))))).)))))).
.)))))).))))).))..)))
..).)))))
SIMILARITIES
miRBase
no hits
PMRD
osa-miRf11559-akr
:
0.000000004
microPC
no hits
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
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