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ABOUT THIS RECORD
ID:
MNEST050816
species:
Oryza sativa
source:
PMRD, original name:
osa-miRf11601-akr
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGTCGCCCTCTGTAAGGGCGGTAAG
miRNA*
TGCCGCCCTCCACTAGGGCGGCAGG
mismatches:
2
bulges:
2
View larger
pre-miRNA
CCT
TGTCGCCCTCTGTAAGGGCGGTAAG
GACCAAAGCGCAAAATGCGCACATGGCGCCGTCGAGCCGCCGTCTGCCACGTCAGCT
TGCCGCCCTCCACTA
GGGCGGCAGG
G
dot-bracket secondary structure
(((
(((((((((..((.(((((((((((
(((....((((.....))))..((((((.(.....).)))))).......)))..))
)))))))))..)).)
))))))))))
)
SIMILARITIES
miRBase
no hits
PMRD
osa-miRf10844-akr
:
0.00008
microPC
no hits
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
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