ABOUT THIS RECORDspecies: Oryza sativa
source: PMRD, original name: osa-miRf11621-akr
Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GGTTAAGCGTGCTTGGCCTG miRNA* GGGTTAAGCGTGCTTGGCCTG mismatches: 0 bulges: 1 |
pre-miRNA
AACTCTAGGGTTAAGCGTGCTTGGCCTGGAGGGTTAAGCTTCTTTTCCGGAAGCCGATCTCCAAAAAAACTCCAGGGTTAAGCGTGCTTGGCCTGGAGGG
TT
dot-bracket secondary structure
((((((.((((((((((((((((((((((((..((..((((((.....)))))).(.....)...))..))))).)))))))))))))))))))..))))
))
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
AACTCTAGGGTTAAGCGTGCTTGGCCTGGAGGGTTAAGCTTCTTTTCCGGAAGCCGATCTCCAAAAAAACTCCAGGGTTAAGCGTGCTTGGCCTGGAGGG
TT
dot-bracket secondary structure
((((((.((((((((((((((((((((((((..((..((((((.....)))))).(.....)...))..))))).)))))))))))))))))))..))))
))
SIMILARITIES| miRBase no hits PMRD osa-miRf11419-akr: 0.0000000003 microPC no hits | UniProt no hits RFAM 5S_rRNA: 0.0003 |
MOREmiRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
