ABOUT THIS RECORDspecies: Oryza sativa
source: PMRD, original name: osa-miRf11629-akr
Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CATCGATGCACGGCACCGTGCAC miRNA* GCATGGTGCCATGCATCGATGTC mismatches: 2 bulges: 0 |
pre-miRNA
GACATTAGCCATGCATGGTGCCATGCATCGATGTCTCTACTGAGTAACGGGTAGGATTCTGGAAGACATCAGCCATGCACGGTGCACGGCATCGATGCAC
GGCACCGTGCACGGCTGATGTC
dot-bracket secondary structure
((((((((((.(((((((((((.((((((((((((..(((((.(((...(((..(((((.....)).))).))).))).)))))...)))))))))))).
))))))))))).))))))))))
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
GACATTAGCCATGCATGGTGCCATGCATCGATGTCTCTACTGAGTAACGGGTAGGATTCTGGAAGACATCAGCCATGCACGGTGCACGGCATCGATGCAC
GGCACCGTGCACGGCTGATGTC
dot-bracket secondary structure
((((((((((.(((((((((((.((((((((((((..(((((.(((...(((..(((((.....)).))).))).))).)))))...)))))))))))).
))))))))))).))))))))))
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
