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ABOUT THIS RECORD
ID:
MNEST050853
species:
Oryza sativa
source:
PMRD, original name:
osa-miRf11638-akr
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CCGATGCCGAACGGGTATGGAAT
miRNA*
TCTGCACCTGGATGGTGTCGTTG
mismatches:
5
bulges:
0
View larger
pre-miRNA
CGTCAGAT
TCTGCACCTGGATGGTGTCGTTG
GCGGCGGCGAGGGTGGGCACCAAGCCGCCGTTGCTTGTGTTGCAAGCGATCTCGAAGCCCGCGCTGCGG
AAGCAGCCGCCG
CCGATGCCGAACGGGTATGGAAT
GTCGACG
dot-bracket secondary structure
(((((.((
(((..(((((..((((((((.((
(((((.(((.((((.(((.....)))...((((((((.....))))))))......)))).))).((..
..)).)))))))
.))))))))..)))))..)))))
.).))))
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
sp|Q9C9L5|WAKLH_ARATH: 0.00003
RFAM
no hits
MORE
miRNEST target predictions
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
download this record