miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST050855
species: Oryza sativa
source: PMRD, original name: osa-miRf11640-akr

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GGTATTACCAACCGGGACTA

miRNA*
AACCCGGTTGGTAACACCAA

mismatches: 3
bulges: 0

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pre-miRNA
GTGATCTTTAAACCCGGTTGGTAACACCAACCGGGACTAAAGATCCCGGGGGCCCTGACAACGTCTGACATCTCTACAACCGGGACTAAAGATGATCTTT
AGTCTCAGTTGGTATTACCAACCGGGACTAAAGATCAC


dot-bracket secondary structure
((((((((((..((((((((((((.((((((.(((((((((((((.((((...)))).....((((....((((.......))))....)))))))))))
)))))).)))))).))))))))))))..))))))))))



SIMILARITIES
miRBase no hits

PMRD osa-miRf11272-akr: 1e-38

microPC no hits
UniProt no hits

RFAM no hits

MORE

miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
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