ABOUT THIS RECORDspecies: Oryza sativa
source: PMRD, original name: osa-miRf11669-akr
Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCAACAACCGGGAGTAAAGA miRNA* TTTACTCCTGGTTGTTGAGA mismatches: 0 bulges: 0 |
pre-miRNA
TAAAGATATCTTTACTCCTGGTTGTTGAGAACAACCGGGACTAAAGATTCTCAACAACCGGGAGTAAAGATATCTTTA
dot-bracket secondary structure
((((((((((((((((((((((((((((((((.............).)))))))))))))))))))))))))))))))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
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TAAAGATATCTTTACTCCTGGTTGTTGAGAACAACCGGGACTAAAGATTCTCAACAACCGGGAGTAAAGATATCTTTA
dot-bracket secondary structure
((((((((((((((((((((((((((((((((.............).)))))))))))))))))))))))))))))))
SIMILARITIES| miRBase osa-MIR2120: 0.00006 PMRD osa-miRf10010-akr: 4e-18 microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
download this record
