ABOUT THIS RECORDspecies: Oryza sativa
source: PMRD, original name: osa-miRf11681-akr
Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GGATGAGGATGTGGCATCCT miRNA* GATGCTATGTCCTCATCCTA mismatches: 0 bulges: 0 |
pre-miRNA
TGTTCCATTAGGATGAGGATGTGGCATCCTATTAATTTCGTGCGATGGCTGGTAATAGGATGCTATGTCCTCATCCTAGGTGAAACA
dot-bracket secondary structure
.(((.(((((((((((((((((((((((((((((...(((.((....))))))))))))))))))))))))))))))).))).))).
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
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TGTTCCATTAGGATGAGGATGTGGCATCCTATTAATTTCGTGCGATGGCTGGTAATAGGATGCTATGTCCTCATCCTAGGTGAAACA
dot-bracket secondary structure
.(((.(((((((((((((((((((((((((((((...(((.((....))))))))))))))))))))))))))))))).))).))).
SIMILARITIES| miRBase osa-MIR807b: 2e-20 PMRD osa-miRf10699-akr: 1e-33 microPC miR807: 9e-29 | UniProt no hits RFAM MIR807: 7e-36 |
MOREmiRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
