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ABOUT THIS RECORD
ID:
MNEST051282
species:
Oryza sativa
source:
PMRD, original name:
osa-miRf12067-akr
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AGTCCCGGTTAGTAACACCAACCGG
miRNA*
GGTTGGAGTTACCAACCGGGACTAA
mismatches:
2
bulges:
0
View larger
pre-miRNA
TTTAGTCCC
GGTTGGAGTTACCAACCGGGACTAA
AGTTCATTTTTAGTCCCGGTTGATTCCATGTCAGGCCGTGTCAGTGCCCTATGATCTTT
AGTCCCG
GTTAGTAACACCAACCGG
GACTAAA
dot-bracket secondary structure
.((((((((
((((((.(((((.((((((((((((
((.((((.....(.(.((((((((.....)))).)))).).)........)))).))))
)))))))
))).))))).))))))))
)))))).
SIMILARITIES
miRBase
no hits
PMRD
osa-miRf11763-akr
:
1e-47
microPC
no hits
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
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