ABOUT THIS RECORDspecies: Oryza sativa
source: PMRD, original name: osa-miRf12073-akr
Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GCCGGTCAGACTGCCTCTGGTCACC miRNA* TGTCCAGAACCGGTCAGACCGGCCG mismatches: 6 bulges: 0 |
pre-miRNA
GCCTTCTGTCCAGAACCGGTCAGACCGGCCGTGCAAGGCTAGTCAGACCGCCCAGGGTGGCCGGTCAGACCGCCGGTATACAGCCGGTCAGACTGCCTCT
GGTCACCGGT
dot-bracket secondary structure
(((...((.(((((..(((((.(((((((.(((...(((..(((.(((((.((.....)).))))).))).)))....))).))))))).)))))..)))
)).))..)))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
GCCTTCTGTCCAGAACCGGTCAGACCGGCCGTGCAAGGCTAGTCAGACCGCCCAGGGTGGCCGGTCAGACCGCCGGTATACAGCCGGTCAGACTGCCTCT
GGTCACCGGT
dot-bracket secondary structure
(((...((.(((((..(((((.(((((((.(((...(((..(((.(((((.((.....)).))))).))).)))....))).))))))).)))))..)))
)).))..)))
SIMILARITIES| miRBase no hits PMRD osa-miRf11874-akr: 0.000000000000002 microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
