ABOUT THIS RECORDspecies: Oryza sativa
source: PMRD, original name: osa-miRf12077-akr
Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GGTGTTACAAACCGGGACTA miRNA* TTCCCGGTTTGTAACACCAA mismatches: 1 bulges: 0 |
pre-miRNA
GATTTTTATTCCCGGTTTGTAACACCAACCGGGACTAAAAATTCTATCTTTAGTTCCGGTTGGTGTTACAAACCGGGACTAAAGATC
dot-bracket secondary structure
((((((((.((((((((((((((((((((((((((((((.........)))))))))))))))))))))))))))))).))))))))
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
GATTTTTATTCCCGGTTTGTAACACCAACCGGGACTAAAAATTCTATCTTTAGTTCCGGTTGGTGTTACAAACCGGGACTAAAGATC
dot-bracket secondary structure
((((((((.((((((((((((((((((((((((((((((.........)))))))))))))))))))))))))))))).))))))))
SIMILARITIES| miRBase no hits PMRD osa-miRf12076-akr: 3e-44 microPC no hits | UniProt no hits RFAM no hits |
Identical with: osa-miRf10258-akr from PMRD (MNEST049473) |
MOREmiRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
