ABOUT THIS RECORDspecies: Picea glauca
source: PMRD, original name: pga-miR156a
Taxonomy by NCBI:
Picea glauca Picea Pinaceae Coniferales Coniferopsida Coniferophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GATCCTAGAGCCCTTGAGCC miRNA* TCGAGTGGCCAGATCTA mismatches: 1 bulges: 5 |
pre-miRNA
GATCCATGGTAGAATGATTCTCGTGCATAAACTGTTCCAATGTGGCACCTGGTCGAGTGGCCAGATCTAATGAAGCTGATCCTAGAGCCCTTGAGCCCAA
TGACTGCGATGACAG
dot-bracket secondary structure
....(((.((((..........((((....((.........)).))))..(((((((.((((.((((..........))))...).)))))))).))...
...)))).)))....
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
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GATCCATGGTAGAATGATTCTCGTGCATAAACTGTTCCAATGTGGCACCTGGTCGAGTGGCCAGATCTAATGAAGCTGATCCTAGAGCCCTTGAGCCCAA
TGACTGCGATGACAG
dot-bracket secondary structure
....(((.((((..........((((....((.........)).))))..(((((((.((((.((((..........))))...).)))))))).))...
...)))).)))....
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
download this record
