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ABOUT THIS RECORD
ID:
MNEST052063
species:
Populus trichocarpa
source:
PMRD, original name:
ptc-miRf10241-akr
Taxonomy by NCBI:
Populus trichocarpa
Populus
Saliceae
Salicaceae
Malpighiales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CTTGGGCTGATGGATATGGGG
miRNA*
TCATTTCTGTCAGTTTATACC
mismatches:
3
bulges:
0
View larger
pre-miRNA
TGGGAGGCT
TCATTTCTGTCAGTTTATACC
GATTATATTGCAAAAAGGCGATCTAGTCTTTAAAATATATATCGCTAATCAAACGGCAGAGAATTATGCA
GATATAATCT
CTTGGGCTGATGGATATGGGG
CTCCCA
dot-bracket secondary structure
.(((((.((
((((.((((((((((((....
((((((((((((.((((((......))))))............(((........))).........))))
.)))))))).
..)))))))))))).))))))
))))).
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
sp|Q9SCZ4|FERON_ARATH: 0.00008
RFAM
no hits
MORE
miRNEST target predictions
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
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