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ABOUT THIS RECORD

ID: MNEST052199
species: Populus trichocarpa
source: PMRD, original name: ptc-miRf10377-akr

Taxonomy by NCBI:
Populus trichocarpa Populus Saliceae Salicaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GACCGGGTTTCACCAGGCCAACTCC

miRNA*
TCTCAGCCGGGTTTACCCGGGTCGC

mismatches: 8
bulges: 2

View larger
pre-miRNA
CGCCGGGTCTCAGCCGGGTTTACCCGGGTCGCCCGGGTTCCGGGTCGCCCGCCGGATCGACCGGGTTTCACCAGGCCAACTCCCGAGCG

dot-bracket secondary structure
(((((((.....(((.(((..((((((.(((.((((....((((...))))))))..)))))))))...))).))).....)))).)))


SIMILARITIES
miRBase no hits

PMRD ptc-miRf11517-akr: 0.00000000000002

microPC no hits
UniProt no hits

RFAM no hits

MORE

miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: not a miRNA
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