ABOUT THIS RECORDspecies: Populus trichocarpa
source: PMRD, original name: ptc-miRf10391-akr
Taxonomy by NCBI:
Populus trichocarpa Populus Saliceae Salicaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AACTTGGGGTTGGGCATGGAC miRNA* CTAGCCCAACTTGGGGGTGG mismatches: 3 bulges: 1 |
pre-miRNA
GCGCGGACGCGTCTAGCCCAACTTGGGGGTGGGCGTGGACGCTTCCTAACTTGGGGTTGGGCATGGACACGTCCAGC
dot-bracket secondary structure
((..(((((.((((((((((((((.(((..(((((....)))..))...))).))))))))).))))).))))).))
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
download this record
GCGCGGACGCGTCTAGCCCAACTTGGGGGTGGGCGTGGACGCTTCCTAACTTGGGGTTGGGCATGGACACGTCCAGC
dot-bracket secondary structure
((..(((((.((((((((((((((.(((..(((((....)))..))...))).))))))))).))))).))))).))
SIMILARITIES| miRBase no hits PMRD ptc-miRf11235-akr: 0.0000009 microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
download this record
