miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST052447
species: Populus trichocarpa
source: PMRD, original name: ptc-miRf10625-akr

Taxonomy by NCBI:
Populus trichocarpa Populus Saliceae Salicaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GGTCGACCCGGTGGGTCGACCCG

miRNA*
 GACCGGCCCGGTGGGTCGACCTG

mismatches: 3
bulges: 0
View larger
pre-miRNA
 CTCGGACCGGCCCGGTGGGTCGACCTGGGACCTGGCCGACCCGGGACCTGGACCGATCCGGGTAAGACAAAAGACCGGCCTAAGGAAAAAACCGGTCAAA
CCCGGTCGACCCGGTGGGTCGACCCGTG

dot-bracket secondary structure
..(((..(((((((.((((((((((.(((.(((((.....)))))(((((((....))))))).........((((((.............))))))...
))))))))))))).)))))))..)))..


SIMILARITIES
miRBase no hits

PMRD ptc-miRf10802-akr: 0.00000000000003

microPC no hits		UniProt no hits

RFAM no hits

MORE

miRNEST target predictions
non-miRNEST targets
HuntMi prediction: not a miRNA
additional data
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