miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST052448
species: Populus trichocarpa
miRNA family: MIRf907
source: PMRD, original name: ptc-miRf10626-akr

Taxonomy by NCBI:
Populus trichocarpa Populus Saliceae Salicaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GCAGCAGGTTTTGCATGCTCT

miRNA*
 GGGCATGCACTCTTGTTGCCA

mismatches: 2
bulges: 2
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pre-miRNA
 TGCATAACATGGGCATGCACTCTTGTTGCCATAGGTACCTGGTGGAACACACCGGCATCTGTTGCAGCAGGTTTTGCATGCTCTGTGGCA

dot-bracket secondary structure
.((...(((.(((((((((..((((((((.((((((.((.((((.....)))))).)))))).))))))))...)))))))))))).)).


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt sp|P46689|GASA1_ARATH: 0.0000000009

RFAM no hits

MORE

miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
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