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ABOUT THIS RECORD

ID: MNEST052450
species: Populus trichocarpa
source: PMRD, original name: ptc-miRf10628-akr

Taxonomy by NCBI:
Populus trichocarpa Populus Saliceae Salicaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CTTGGACTTGGCTAACTGCCAAGTTC

miRNA*
ACTTGGTTGACTGCCAAGTCCAAGCG

mismatches: 5
bulges: 0

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pre-miRNA
CTTGGACTTGGTTGACTGCCAAGTCCAAGCGTTTTAGGTTTAACATGTGTGCCATACTTACATTCCTTGGACGTGGCTGACTGCCAAGCCAAGTCTAAAC
GTCTTAGGTTTGACATGTGTGCCAAACCCACGTTCCTTGGACTTGGCTAACTGCCAAGTTCAAG


dot-bracket secondary structure
((((((((((((.....(((((((((((((((....(((((..((((..((.((.(((((......((((((.(((((........))))).))))))..
....))))).)).))..))))..))))).)))...)))))))))))).....))))))))))))



SIMILARITIES
miRBase no hits

PMRD ptc-miRf10243-akr: 0.00000003

microPC no hits
UniProt no hits

RFAM no hits

MORE

miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
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