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ABOUT THIS RECORD

ID: MNEST052708
species: Populus trichocarpa
source: PMRD, original name: ptc-miRf10886-akr

Taxonomy by NCBI:
Populus trichocarpa Populus Saliceae Salicaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GGAATATTTCCGTCGGTAAA

miRNA*
TACCGATGAAAATATTCCGT

mismatches: 1
bulges: 0

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pre-miRNA
ATACCGAGGGAATATTTCCGTCGGTAAAATCCCTCGGAAATTTACCGATGAAAATATTCCGTCGGTAT

dot-bracket secondary structure
(((((((.(((((((((.((((((((((.(((...)))..)))))))))).))))))))).)))))))


SIMILARITIES
miRBase no hits

PMRD ptc-miRf10885-akr: 4e-33

microPC no hits
UniProt no hits

RFAM no hits

Identical with: ptc-miRf10885-akr from PMRD (MNEST052707)

MORE

miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
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