miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST052781
species: Populus trichocarpa
source: PMRD, original name: ptc-miRf10959-akr

Taxonomy by NCBI:
Populus trichocarpa Populus Saliceae Salicaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GTTGAGATGGTTCTTTGACA

miRNA*
TCAAAGAACCATCTCAACCT

mismatches: 0
bulges: 0

View larger
pre-miRNA
AAGTTATTAAGTTGAGATGGTTCTTTGACATGGTATCAAAGCCTTGATAATTAGATAAACATGCATGTGATGATGGGTAAGAGATTCGAACTTGTGACCG
CTTTGTCATTAAAGCTCTGATACCATGTCAAAGAACCATCTCAACCTAATAGCTT


dot-bracket secondary structure
(((((((((.((((((((((((((((((((((((((((.(((.(((((.....((((((.......(((.(.(..(((..(.....)..)))..).).))
)))))))))))).))).)))))))))))))))))))))))))))).)))))))))



SIMILARITIES
miRBase ptc-MIR481e: 4e-20

PMRD ptc-miR481e: 4e-20

microPC no hits
UniProt no hits

RFAM no hits

MORE

miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
download this record





Liczniki na strone;