miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST052789
species: Populus trichocarpa
source: PMRD, original name: ptc-miRf10967-akr

Taxonomy by NCBI:
Populus trichocarpa Populus Saliceae Salicaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TAATTCCGTCGGTATATACCGAC

miRNA*
CGGTATATACCGACGAAATTACA

mismatches: 3
bulges: 0

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pre-miRNA
TTCCGTCTGTAATTCCGTCGGTATATACCGACCAGATTAGTTCGCCGGTATATACCGACGAAATTACAGACGGAA

dot-bracket secondary structure
.(((((((((((((.(((((((((((((((....((.....))..))))))))))))))).))))))))))))).


SIMILARITIES
miRBase no hits

PMRD ptc-miRf12392-akr: 4e-18

microPC no hits
UniProt no hits

RFAM no hits

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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