miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST052890
species: Populus trichocarpa
source: PMRD, original name: ptc-miRf11068-akr

Taxonomy by NCBI:
Populus trichocarpa Populus Saliceae Salicaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GGGAAAACACTTTCCTGGAA

miRNA*
 CCAGAAAGTGTTTTCCTTT

mismatches: 2
bulges: 1
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pre-miRNA
 GTCAAAAGGGAAAACACTTTCCTGGAACCCAAGCCAAATTTTCCTTTAACTGGAAAGTATTTTTTGTTGACCAGAAAGTGTTTTCCTTTGAC

dot-bracket secondary structure
(((((..((((((((((((((.(((....((((....(((((((.......)))))))....))))....))))))))))))))))))))))


SIMILARITIES
miRBase no hits

PMRD ptc-miRf10318-akr: 3e-22

microPC no hits		UniProt no hits

RFAM no hits

MORE

miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
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