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ABOUT THIS RECORD
ID:
MNEST053091
species:
Populus trichocarpa
source:
PMRD, original name:
ptc-miRf11269-akr
Taxonomy by NCBI:
Populus trichocarpa
Populus
Saliceae
Salicaceae
Malpighiales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GCCGCCGATTTCTGCATCGGCAGC
miRNA*
TGCCGATTTCTAAATCGGCAGCAA
mismatches:
5
bulges:
0
View larger
pre-miRNA
GTTTT
GCCGCCGATTTCTGCATCGGCAGC
GACACAGTTTTGGC
TGCCGATTTCTAAATCGGCAGCAA
CGC
dot-bracket secondary structure
((.((
((.((((((((....(((((((((
.(........).))
)))))))....)))))))).))))
.))
SIMILARITIES
miRBase
no hits
PMRD
ptc-miRf11668-akr
:
3e-34
microPC
no hits
UniProt
no hits
RFAM
no hits
Identical with:
ptc-miRf11668-akr
from PMRD (
MNEST053490
)
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
download this record