ABOUT THIS RECORDspecies: Populus trichocarpa
source: PMRD, original name: ptc-miRf11386-akr
Taxonomy by NCBI:
Populus trichocarpa Populus Saliceae Salicaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GGAATATTTCCGTCGGTAAA miRNA* TACCGACGGAAATATTCCAT mismatches: 0 bulges: 0 |
pre-miRNA
ATACCGAGGGAATATTTCCGTCGGTAAAATCCCTCGGAAATTTACCGACGGAAATATTCCATCGGTAT
dot-bracket secondary structure
(((((((.((((((((((((((((((((.(((...)))..)))))))))))))))))))).)))))))
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
download this record
ATACCGAGGGAATATTTCCGTCGGTAAAATCCCTCGGAAATTTACCGACGGAAATATTCCATCGGTAT
dot-bracket secondary structure
(((((((.((((((((((((((((((((.(((...)))..)))))))))))))))))))).)))))))
SIMILARITIES| miRBase no hits PMRD ptc-miRf11584-akr: 4e-33 microPC no hits | UniProt no hits RFAM no hits |
Identical with: ptc-miRf11584-akr from PMRD (MNEST053406) |
MOREmiRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
download this record
