ABOUT THIS RECORDspecies: Populus trichocarpa
source: PMRD, original name: ptc-miRf11452-akr
Taxonomy by NCBI:
Populus trichocarpa Populus Saliceae Salicaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CTGACGGTATTACCGACGGA miRNA* CGTCGGTAATACTGTCAGAA mismatches: 0 bulges: 0 |
pre-miRNA
ATTTCTGACGGTATTACCGACGGAATTTAATGCCACCGACAACAATTAATGTCCGTCGGTAATACTGTCAGAAAT
dot-bracket secondary structure
((((((((((((((((((((((((..(((((.............)))))..))))))))))))))))))))))))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
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ATTTCTGACGGTATTACCGACGGAATTTAATGCCACCGACAACAATTAATGTCCGTCGGTAATACTGTCAGAAAT
dot-bracket secondary structure
((((((((((((((((((((((((..(((((.............)))))..))))))))))))))))))))))))
SIMILARITIES| miRBase no hits PMRD ptc-miRf12249-akr: 3e-37 microPC no hits | UniProt no hits RFAM no hits |
Identical with: ptc-miRf12249-akr from PMRD (MNEST054071) |
MOREmiRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
