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ABOUT THIS RECORD
ID:
MNEST053318
species:
Populus trichocarpa
source:
PMRD, original name:
ptc-miRf11496-akr
Taxonomy by NCBI:
Populus trichocarpa
Populus
Saliceae
Salicaceae
Malpighiales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ATTACCGACGGATTTACTGACGGA
miRNA*
CGTCGGTAATTCCGTCGGTAATTA
mismatches:
1
bulges:
0
View larger
pre-miRNA
ATA
ATTACCGACGGATTTACTGACGGA
ACATACGCGTCGGTAATAATTTTTTTATTACCAACGGAATTACCGACAGATTTACCGATGGAATTTC
CGTCGG
TAATTCCGTCGGTAATTA
T
dot-bracket secondary structure
(((
((((((((((((.(((((((((((
(.((.(.(((((((((((((......))))....(((.....)))......)))))))))).)))))
))))))
))).))))))))))))))
)
SIMILARITIES
miRBase
no hits
PMRD
ptc-miRf12399-akr
:
2e-30
microPC
no hits
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record