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ABOUT THIS RECORD
ID:
MNEST053330
species:
Populus trichocarpa
source:
PMRD, original name:
ptc-miRf11508-akr
Taxonomy by NCBI:
Populus trichocarpa
Populus
Saliceae
Salicaceae
Malpighiales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTTGGCTTGGAAGCCAGACC
miRNA*
TCTGGCTACCAAGCGAGACC
mismatches:
2
bulges:
0
View larger
pre-miRNA
TTGAG
TTTGGCTTGGAAGCCAGACC
CAACAGCTTTTAGAAACGATTTGGG
TCTGGCTACCAAGCGAGACC
CAA
dot-bracket secondary structure
.((.(
(((.((((((.(((((((((
(((.................)))))
))))))).)))))).)))).
)).
SIMILARITIES
miRBase
no hits
PMRD
ptc-miRf11193-akr
:
0.00001
microPC
no hits
UniProt
no hits
RFAM
MIR474: 8e-35
MORE
miRNEST target predictions
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
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