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ABOUT THIS RECORD
ID:
MNEST053386
species:
Populus trichocarpa
source:
PMRD, original name:
ptc-miRf11564-akr
Taxonomy by NCBI:
Populus trichocarpa
Populus
Saliceae
Salicaceae
Malpighiales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GAGGGAATATTTCCGTCGGTA
miRNA*
CCGATGGAAATATTCCCTCGG
mismatches:
0
bulges:
0
View larger
pre-miRNA
GGTATATACT
GAGGGAATATTTCCGTCGGTA
AAATCCCTCGGAAATTTA
CCGATGGAAATATTCCCTCGG
TATTTCC
dot-bracket secondary structure
((...(((((
(((((((((((((((((((((
((.(((...)))..))))
)))))))))))))))))))))
)))..))
SIMILARITIES
miRBase
no hits
PMRD
ptc-miRf11768-akr
:
2e-38
microPC
no hits
UniProt
no hits
RFAM
no hits
Identical with:
ptc-miRf11768-akr
from PMRD (
MNEST053590
)
MORE
miRNEST target predictions
non-miRNEST targets
HuntMi prediction:
true miRNA
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