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ABOUT THIS RECORD

ID: MNEST054339
species: Populus trichocarpa
source: PMRD, original name: ptc-miRf12517-akr

Taxonomy by NCBI:
Populus trichocarpa Populus Saliceae Salicaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ATTTCGGTTCGGTTCGGTTAAT

miRNA*
 AAACCGAACCGAACCGAACCG

mismatches: 4
bulges: 0
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pre-miRNA
 CGGATTTCGGTTCGGTTCGGTTAATATTTCACTAAACTAACATAACTCGGTTCGGTTGGTTTTTTAAGTCTAAACCGAACCGAACCGAACCG

dot-bracket secondary structure
(((..(((((((((((((((((.(.((((....((((((((..(((...)))..))))))))...)))).).))))))))))))))))))))


SIMILARITIES
miRBase no hits

PMRD ptc-miRf12252-akr: 2e-42

microPC no hits		UniProt no hits

RFAM no hits

MORE

miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
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