ABOUT THIS RECORDspecies: Populus tremuloides
source: PMRD, original name: pts-miR156a
Taxonomy by NCBI:
Populus tremuloides Populus Saliceae Salicaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGACAGAAGAGAGTGAGCGC miRNA* GTCTTGTACTTGTGTTG mismatches: 6 bulges: 3 |
pre-miRNA
TGACAGAAGAGAGTGAGCGCGCAATCCGAGTCTTGTACTTGTGTTG
dot-bracket secondary structure
.((((.(((...(..(((.((.....)).).))..).))).)))).
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
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TGACAGAAGAGAGTGAGCGCGCAATCCGAGTCTTGTACTTGTGTTG
dot-bracket secondary structure
.((((.(((...(..(((.((.....)).).))..).))).)))).
SIMILARITIES| miRBase zma-MIR156g: 0.0004 PMRD pts-miR156c: 0.000007 microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
download this record
