ABOUT THIS RECORDspecies: Sorghum bicolor
miRNA family: MIR437
source: PMRD, original name: sbi-miR437e
Taxonomy by NCBI:
Sorghum bicolor Sorghum Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AAAGTTAGAGAAGTTTGACTT miRNA* mismatches: 5 bulges: 2 |
pre-miRNA
CAGATTACTGATTTTGATCAACATTGTCTGAAATACTAAATCAATTAGATGTTAATATATATTTTTCTGAAAACTTGGTCAAAGTTAGAGAAGTTTGACT
T
dot-bracket secondary structure
((((((.((((((((((((((.....((.((((..((((.....)))).(((......)))..)))).))....))))))))))))))...))))))...
.
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
additional data
download this record
references
[1] Zhang L, Ware D, Unpublished (2009).,
CAGATTACTGATTTTGATCAACATTGTCTGAAATACTAAATCAATTAGATGTTAATATATATTTTTCTGAAAACTTGGTCAAAGTTAGAGAAGTTTGACT
T
dot-bracket secondary structure
((((((.((((((((((((((.....((.((((..((((.....)))).(((......)))..)))).))....))))))))))))))...))))))...
.
SIMILARITIES| miRBase sbi-MIR437e: 1e-52 PMRD sbi-miR437k: 0.000000000000001 microPC miR437: 0.00000000000008 | UniProt no hits RFAM no hits |
Identical with: sbi-MIR437e from miRBase (MNEST042605) |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
additional data
download this record
references
[1] Zhang L, Ware D, Unpublished (2009).,
