ABOUT THIS RECORDspecies: Triticum aestivum
source: PMRD, original name: tae-miR156a
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGACAGAAGAGAGAGAGCAC miRNA* GCTCCACCTAATTTTGAA mismatches: 6 bulges: 3 |
pre-miRNA
TGACAGAAGAGAGAGAGCACGCTGAAGATCCGGTGCTCCACCTAATTTTGAA
dot-bracket secondary structure
...(((((...((.((((((.(.(.....).)))))))...))..)))))..
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
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TGACAGAAGAGAGAGAGCACGCTGAAGATCCGGTGCTCCACCTAATTTTGAA
dot-bracket secondary structure
...(((((...((.((((((.(.(.....).)))))))...))..)))))..
SIMILARITIES| miRBase zma-MIR156j: 0.0001 PMRD tae-miR156b: 1e-23 microPC miR157: 0.0001 | UniProt no hits RFAM no hits |
Identical with: tae-miR156b from PMRD (MNEST054672) |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
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