miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST054682
species: Triticum aestivum
source: PMRD, original name: tae-miR171c

Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TAATTGAGCCGCGCCCATATC

miRNA*
 TCAGGGCCGGCGAGCCC

mismatches: 12
bulges: 1
View larger
pre-miRNA
 TAATTGAGCCGCGCCCATATCTCGCGTGCGCCGAAGGCGTCGCCCGCCTCGGCAACTTTGGCAGCCTCGGCGAGCTGGTCCACCGTGCCGGCCGCCTCGT
CGTTCGCTGTCCCGGCCTTGGCTTTCAGGNCGGGGAAGAACCCGCCCGCCGGAGCGAGATGCCCCTGGAAAGCAGGCAGCTTCGGCGCCGGCGCGCCTGC
CATCGGGTGGTGGCGCTTGGGCGGCGGCGGCGCCGACTCGAAAGACGGGTGCGCGCCAAAGAAGGCCGCGTGTGGCTGGGGGTGGTGTTGGTGCTGGTGG
AGCAGGAAGCTGGGCGCGTGGCCGAAAGGGGCCCCCTTGGCGTCCTCCATGGCCGGCGCGAACGGCGACAGGCTGGGCCCGAGAGACGCCGCAGGCGGCG
ACATCATAGACGTGGCGTGGTCGAGCTCCAGAGCGGGCGGATCCATGACGCCGGCCATCCCCGCGGACGCGTCCTCGCCGCCGCCAATGATCCAGCGGAG
GAAGGTGCTGTCAGGGCCGGCGAGCCC

dot-bracket secondary structure
.......((((.((((.........((..(((((.((((.....))))))))).))..(((((((((.((((.((((((.......))))))))))...(
(.(((((((.(((((((.((((((((.((.((((......))))))((((.(((((...(((((((((...((((((.((.(((....))).))))))))
..))))).)))).))))).))))..(((((((((...((....))..))))).))))...)))))))).....))))))).((((((((....(.(((..
(((..(..((((..((((((((((...(((((((....)).)))))...))))).)))))..))))..)..)))..))).)...)))))))).(((((((
..........(((((.((((((..(((....))).((((.........))))))))))..)))))...(((....)))))))))).......))))))).
)).)).)))))))))))))))......


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits

MORE

miRNEST target predictions: none
non-miRNEST targets: none
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