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ABOUT THIS RECORD
ID:
MNEST054686
species:
Triticum aestivum
source:
PMRD, original name:
tae-miR319a
Taxonomy by NCBI:
Triticum aestivum
Triticum
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTGGACTGAAGGGAGCTCCC
miRNA*
GAGCTCACTTCAGTCCACTC
mismatches:
2
bulges:
0
View larger
pre-miRNA
GG
GAGCTCACTTCAGTCCACTC
ATGGGAGGTAGCGGGGATTGAACGAGCTGCCGACTCATTCACTCGAGCACACAGTAGATATGAGACTAGTCCAGGGCA
TACCAGTATGTTACAATATGTACTGTGCGAATGAGCGAATGCAGCGGGAGATTGTTCTCTCTTTCCTCCTCCATGC
TTGGACTGAAGGGAGCTCCC
dot-bracket secondary structure
((
((((((.((((((((((..(
((((.(((.((..((((..((((((.((.(((.(((((((.((((..(.(((((((.((((..((....))...((((
((....))))))...)))).))))))).)..)))).))))).))))).)).))))))..))))..)))))))))).
.)))))))))).))))))))
SIMILARITIES
miRBase
tae-MIR319
:
6e-109
PMRD
ath-miR319b
:
0.000003
microPC
miR319
:
0.000003
UniProt
no hits
RFAM
MIR159: 0.00005
Identical with:
tae-MIR319
from miRBase (
MNEST042642
)
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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