ABOUT THIS RECORDspecies: Triticum aestivum
miRNA family: MIR2001
source: PMRD, original name: tae-miR2001
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CGCTCGCCGGAGCAGCGTGCA miRNA* CGCGCTGCTCCGTCGAGCATG mismatches: 2 bulges: 0 |
pre-miRNA
GGCGGCTCCGCTCGCCGGAGCAGCGTGCAACGGAGGGATCCTGCGCGCTGCTCCGTCGAGCATGGCCACC
dot-bracket secondary structure
((.((((..(((((.((((((((((((((..(((....))))))))))))))))).)))))..)))).))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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GGCGGCTCCGCTCGCCGGAGCAGCGTGCAACGGAGGGATCCTGCGCGCTGCTCCGTCGAGCATGGCCACC
dot-bracket secondary structure
((.((((..(((((.((((((((((((((..(((....))))))))))))))))).)))))..)))).))
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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