ABOUT THIS RECORDspecies: Triticum aestivum
source: PMRD, original name: tae-miR2004
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTTGTTTTTATGTTATTTTGTGAA miRNA* CAGAAATAGGAAAGCAGAAT mismatches: 0 bulges: 4 |
pre-miRNA
TTGTTCAGAAATAGGAAAGCAGAATGAAATCCAGTCTTAGTCAAATATTTCATATCTCTTCTTATCCATTTAAACATATGGATTTAGAGTAGAGCATATG
GATCAATCTATTTATAATTATAAGAATCGAATGTGTTTGTTTTTATGTTATTTTGTGAAGAA
dot-bracket secondary structure
.(.((((((((((((((((((((......((...(((((...(((((.(((((((((((.(((((((((........))))))...))).)))).)))))
))......))))).......)))))...)).....)))))))))...))))))).)))).).
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
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TTGTTCAGAAATAGGAAAGCAGAATGAAATCCAGTCTTAGTCAAATATTTCATATCTCTTCTTATCCATTTAAACATATGGATTTAGAGTAGAGCATATG
GATCAATCTATTTATAATTATAAGAATCGAATGTGTTTGTTTTTATGTTATTTTGTGAAGAA
dot-bracket secondary structure
.(.((((((((((((((((((((......((...(((((...(((((.(((((((((((.(((((((((........))))))...))).)))).)))))
))......))))).......)))))...)).....)))))))))...))))))).)))).).
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
download this record
