ABOUT THIS RECORDspecies: Triticum aestivum
source: PMRD, original name: tae-miR2008
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GACTCCGTGGCCCAATGGA miRNA* CGCATGGTCATTCAGTCAC mismatches: 5 bulges: 0 |
pre-miRNA
GCTGCCACTAATCCGCATGGTCATTCAGTCACTAGTGTCTAATGGAGGAGTGAGTAAGGTTAACGTTTCATTGCATTCGCCAGGACTCCGTGGCCCAATG
GATAAGGCGC
dot-bracket secondary structure
((.(((....(((((...((((((..((((.((.(((..((((((((..((...........)).))))))))....))).))))))..))))))...))
)))..)))))
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
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GCTGCCACTAATCCGCATGGTCATTCAGTCACTAGTGTCTAATGGAGGAGTGAGTAAGGTTAACGTTTCATTGCATTCGCCAGGACTCCGTGGCCCAATG
GATAAGGCGC
dot-bracket secondary structure
((.(((....(((((...((((((..((((.((.(((..((((((((..((...........)).))))))))....))).))))))..))))))...))
)))..)))))
SIMILARITIES| miRBase no hits PMRD ppt-miR896: 0.00008 microPC no hits | UniProt no hits RFAM tRNA: 0.0000004 |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
download this record
