ABOUT THIS RECORDspecies: Zea mays
miRNA family: MIR167
source: PMRD, original name: zma-miR167l
Taxonomy by NCBI:
Zea mays Zea Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGAAGCTGCCAGCATGATCTG miRNA* GATCGTGCTGCGCAGTTTCA mismatches: 1 bulges: 1 |
pre-miRNA
TGAAGCTGCCAGCATGATCTGATCTTTCGTTTACTGGCAACTTTGGATACCTAAGATCCAGATCGTGCTGCGCAGTTTCA
dot-bracket secondary structure
.(((((((((((((((((((((((((..(((((..(....)..)))))....))))).)))))))))))).)))))))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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TGAAGCTGCCAGCATGATCTGATCTTTCGTTTACTGGCAACTTTGGATACCTAAGATCCAGATCGTGCTGCGCAGTTTCA
dot-bracket secondary structure
.(((((((((((((((((((((((((..(((((..(....)..)))))....))))).)))))))))))).)))))))).
SIMILARITIES| miRBase zma-MIR167f: 4e-40 PMRD zma-miR167f: 4e-40 microPC miR167: 0.0000002 | UniProt no hits RFAM MIR167_1: 0.000000000000005 |
Identical with: zma-MIR167f from miRBase (MNEST042736) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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