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ABOUT THIS RECORD
ID:
MNEST054991
species:
Zea mays
miRNA family:
MIR167
source:
PMRD, original name:
zma-miR167n
Taxonomy by NCBI:
Zea mays
Zea
Andropogoneae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGAAGCTGCCAGCATGATCTA
miRNA*
GCAGATCTCAGTTTGGTAGCTTCTTC
mismatches:
3
bulges:
5
View larger
pre-miRNA
GAGTTT
GCAGATCTCAGTTTGGTAGCTTCTTC
TATTCCACTGGCCATCACTTGCTTTGATTTCTTCCGTTTCTTATAGGTTGTACAACTTTCTGTTCTTT
GGATCTGAGATTGAATAATCACTCATCTACACCTAGTCATGGTATTTTATGCAACATGTTCTAGCTAGCCTGGAACTGCCTGCTCAAGGGAACGAG
TGAA
GCTGCCAGCATGATCTA
GCTC
dot-bracket secondary structure
(((((.
..(((((...(((.((((((((((((
..((((....(((((.(((...((..(((((.((((......(((((..(.....)..)))))....)
)))...)))))..))...................))).))))).......(((.((.(((((((.....)))))))))..)))....))))..)))
.)))
)))))))))..))))))
))))
SIMILARITIES
miRBase
tae-MIR167
:
0.00000000000001
PMRD
tae-miR167
:
0.00000000000001
microPC
miR167
:
0.000003
UniProt
no hits
RFAM
MIR167_1: 0.0000000000002
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
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