miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST054993
species: Zea mays
miRNA family: MIR167
source: PMRD, original name: zma-miR167p

Taxonomy by NCBI:
Zea mays Zea Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGAAGCTGCCAGCATGATCTA

miRNA*
GGTCATGCTGCTGCAGCCTCACT

mismatches: 1
bulges: 2

View larger
pre-miRNA
GAGTGAAGCTGCCAGCATGATCTAGCTCTGAGTGATCACCCGAAAAAGAACAATAGTTCTAGGTGGTCATGCCTTGCTAGGTCATGCTGCTGCAGCCTCA
CT
T


dot-bracket secondary structure
((((((.(((((((((((((((((((.....(((((((((......(((((....))))).))))))))).....))))))))))))))..))))).)))
))
)



SIMILARITIES
miRBase zma-MIR167d: 9e-54

PMRD zma-miR167d: 9e-54

microPC miR167: 0.000001
UniProt no hits

RFAM MIR167_1: 8e-36

Identical with: zma-MIR167d from miRBase (MNEST042734)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record





Liczniki na strone;