ABOUT THIS RECORDspecies: Zea mays
miRNA family: MIR167
source: PMRD, original name: zma-miR167s
Taxonomy by NCBI:
Zea mays Zea Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGAAGCTGCCAGCATGATCTA miRNA* GATCATGCTGTGGCAGCTCACT mismatches: 0 bulges: 3 |
pre-miRNA
GAGTGAAGCTGCCAGCATGATCTAGCTCGGAGTGATCACGCGAGGAGACATAGCTCGAGGTGGTCATGCCTTGCTAGATCATGCTGTGGCAGCTCACTT
dot-bracket secondary structure
((((((.(((((((((((((((((((..((.((((((((.((((.........))))..)))))))).))..))))))))))))..)))))))))))))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record
GAGTGAAGCTGCCAGCATGATCTAGCTCGGAGTGATCACGCGAGGAGACATAGCTCGAGGTGGTCATGCCTTGCTAGATCATGCTGTGGCAGCTCACTT
dot-bracket secondary structure
((((((.(((((((((((((((((((..((.((((((((.((((.........))))..)))))))).))..))))))))))))..)))))))))))))
SIMILARITIES| miRBase zma-MIR167c: 5e-40 PMRD zma-miR167q: 5e-40 microPC miR167: 0.000001 | UniProt no hits RFAM MIR167_1: 8e-39 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record
