ABOUT THIS RECORDspecies: Zea mays
source: PMRD, original name: zma-miR170o
Taxonomy by NCBI:
Zea mays Zea Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGATTGAGCCACGTCAATATC miRNA* TATGACAAGAAGT mismatches: 12 bulges: 1 |
pre-miRNA
TGATTGAGCCACGTCAATATCTCATGCTTGCCATGGGTATGACAAGAAGTTG
dot-bracket secondary structure
............((((.((((.((((.....)))))))))))).........
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
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TGATTGAGCCACGTCAATATCTCATGCTTGCCATGGGTATGACAAGAAGTTG
dot-bracket secondary structure
............((((.((((.((((.....)))))))))))).........
SIMILARITIES| miRBase vvi-MIR171b: 0.0005 PMRD zma-miR170n: 0.00003 microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
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