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ABOUT THIS RECORD
ID:
MNEST055374
species:
Arabidopsis thaliana
miRNA family:
MIR414
source:
miRNEST
Taxonomy by NCBI:
Arabidopsis thaliana
Arabidopsis
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCATCTTCATCATCATCATCT
miRNA*
ATGCGATAATGATAAGTGATG
mismatches:
4
bulges:
2
View larger
pre-miRNA
AATGCTGTGACAG
ATGCGATAATGATAAGTGATG
ATGAAAATGATAATAATCCACCTATTGAGAGTAACATAAGCTCTCATCGGTCTGGTGATAGAAACC
AAGNAGNAGAAGGCAGGNACAGAGGAAACTCAGCGACTGAGAACCGAGCTTCGGGAGAAACCTTTACTCCGGTATCTGCTAATCATCCACCGCCTTTTTC
TCCTTCATCG
TCATCTTCATCATCATCATCT
TCAGACGGCG
dot-bracket secondary structure
...(((((((.((
(((.(((.((((...((((((
(((((...(((....))).(((...(((((((.......)))))))..))).((((.......)))
).(.((.(((((((.((....((.((..(((((...)))))..((((...)))).(((.(((........))).))).....)).))..))))))))).)
).))))))))
))))..)))).)))..)))))
))..))))).
SIMILARITIES
miRBase
ath-MIR414
:
0.00005
PMRD
ath-miR414
:
0.00005
microPC
no hits
UniProt
no hits
RFAM
mir-598: 0.0000002
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
Source sequences
degradome data
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