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ABOUT THIS RECORD

ID: MNEST055410
species: Zea mays
miRNA family: miR166d
source: miRNEST

Taxonomy by NCBI:
Zea mays Zea Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GGAATGTTGTCTGGTTCAAGG

miRNA*
 TCGGACCAGGCTTCATTCCCC

mismatches: 3
bulges: 0
View larger
pre-miRNA
 AGATATGAAGCTACTTGCTTCTGAGTGGAATGTTGTCTGGTTCAAGGTCTTGCTTTCCGATTTGAGGATGATCCATGCTTGCATGTGTAGTTTTTTTTGT
TCCTCAGATCTACAAGATCTCGGACCAGGCTTCATTCCCCTCAGGAATAGCTTCAAAATAATA

dot-bracket secondary structure
.....((((((((.....(((((((.((((((..(((((((((.((((((((......((((((((((.((.....(((.((....)))))....))...
))))))))))..)))))))).)))))))))..)))))).))))))).))))))))........


SIMILARITIES
miRBase zma-MIR166b: 8e-46

PMRD zma-miR166b: 8e-46

microPC miR166: 1e-44		UniProt no hits

RFAM mir-166: 6e-47		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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