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ABOUT THIS RECORD
ID:
MNEST055418
species:
Arabidopsis thaliana
miRNA family:
MIRf382
source:
miRNEST
Taxonomy by NCBI:
Arabidopsis thaliana
Arabidopsis
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GGTGGTGAAGAAGCATGGTTT
miRNA*
ATAATGCTGTTTCACTACGAT
mismatches:
5
bulges:
0
View larger
pre-miRNA
ATAACTTCTCT
ATAATGCTGTTTCACTACGAT
GGCCGGGCAGCGAATGGGAAGAGTTTGAATGGTCCAAGCGAGCCATTCATGTGAGCATTCGGAAACAA
ACAAAATGGTGGTACGCTAAGCGATTTCTTCATCCTGACATAGTTGCCCCCTATGAATATATCTTCATATGGGATGAGGATCTTGGCGTGGAACACTTTG
ATTCGGAAAAATATCTGGC
GGTGGTGAAGAAGCATGGTTT
GGAAATCTC
dot-bracket secondary structure
.....((((..
((.(((((.(((((((((..(
(.(((.((.((((((((.....(((((.......)))))...))))))..))..))...)))...)).
.(((...((((.(((((((((.....(((((((((((..............((((((......))))))))))))))))).)))))))))...)))))))
..(((((......))))).
.))))))))).))))).))..
)))).....
SIMILARITIES
miRBase
no hits
PMRD
ath-miRf10763-akr
:
0.00000000001
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record