ABOUT THIS RECORDspecies: Populus alba x Populus tremula var. glandulosa
miRNA family: MIRf1215
source: miRNEST
SEQUENCE & STRUCTURE| miRNA CCTGGTCATTTTGTTTATAGG miRNA* TGTGAACATCTTGACCAGGGG mismatches: 3 bulges: 0 |
pre-miRNA
ACATTAACATCCCTGGTCATTTTGTTTATAGGACTCGGTTTTCAAGGACTTCTGGGAAGAGCTTTCTTTTGCCACAATGCAGGACAGATGTATTATACGT
GTCTGATCCCTGTGAACATCTTGACCAGGGGGATGAAGG
dot-bracket secondary structure
.((((....((((((((((...((((((((((..((((....((...((.((((.(((((....)))))(((......)))...)))).))........)
).))))..))))))))))...))))))))))))))....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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ACATTAACATCCCTGGTCATTTTGTTTATAGGACTCGGTTTTCAAGGACTTCTGGGAAGAGCTTTCTTTTGCCACAATGCAGGACAGATGTATTATACGT
GTCTGATCCCTGTGAACATCTTGACCAGGGGGATGAAGG
dot-bracket secondary structure
.((((....((((((((((...((((((((((..((((....((...((.((((.(((((....)))))(((......)))...)))).))........)
).))))..))))))))))...))))))))))))))....
SIMILARITIES| miRBase no hits PMRD ptc-miRf11908-akr: 2e-67 microPC no hits | UniProt sp|Q9LF38|EDL1_ARATH: 1e-16 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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