ABOUT THIS RECORDspecies: Arabidopsis thaliana
miRNA family: MIR2936
source: miRNEST
Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CTTGAGAGAGAGAACACAGACG miRNA* TCTGTTTTCTCTCTTTTCAAGAA mismatches: 2 bulges: 1 |
pre-miRNA
CTTCAAACCATTTTCGAAAGCCTTGAGAGAGAGAACACAGACGATACCAACTTTCTTCAATMTCGTTGSCGCAGTATAATTATCTCATTCCTCGGATATA
TSTCTSSTTCTGCGGCGGCGACAAGAAGCTACAAGAATAAAAAGTCTGTTTTCTCTCTTTTCAAGAAACCACTTACTTCGAAAAT
dot-bracket secondary structure
.........(((((((((((.((((((((((((((.((((((........(((.((((....((((((.(((((......(((((........)))))..
.........))))).))))))...))))....)))........)))))).))))))).)))))))......))...)))))))))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
Source sequences
download this record
CTTCAAACCATTTTCGAAAGCCTTGAGAGAGAGAACACAGACGATACCAACTTTCTTCAATMTCGTTGSCGCAGTATAATTATCTCATTCCTCGGATATA
TSTCTSSTTCTGCGGCGGCGACAAGAAGCTACAAGAATAAAAAGTCTGTTTTCTCTCTTTTCAAGAAACCACTTACTTCGAAAAT
dot-bracket secondary structure
.........(((((((((((.((((((((((((((.((((((........(((.((((....((((((.(((((......(((((........)))))..
.........))))).))))))...))))....)))........)))))).))))))).)))))))......))...)))))))))
SIMILARITIES| miRBase ath-MIR2936: 4e-94 PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
Source sequences
download this record
