ABOUT THIS RECORDspecies: Homo sapiens
miRNA family: miR-1909
source: miRNEST
Taxonomy by NCBI:
Homo sapiens Homo Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGAGTGCCGGTGCCTGCCCTG miRNA* GCGAGGACGCCGGCGCCTGCA mismatches: 3 bulges: 2 |
pre-miRNA
ACTACCTCAGACAGATCATCCAGGACAATGGTGAGTGCCGGTGCCTGCCCTGGGGCCGTCCCTGCGCAGGGGCCGGGTGCTCACCGCATCTGCCCCGCAG
TGGATGGGCACAGCTCCAGCGAGGACGCCGGCGCCTGCATGCACCTGGTGATCTGGAAGGTTCGAGA
dot-bracket secondary structure
...((((....(((((((.(((((.((...(((.((((((((((((...(((((((.(((((..(((.(((((.((((((.....)))))))))))...)
))...))).)).)))))))..))).))))))))).))).))..))))))))))))..))))......
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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ACTACCTCAGACAGATCATCCAGGACAATGGTGAGTGCCGGTGCCTGCCCTGGGGCCGTCCCTGCGCAGGGGCCGGGTGCTCACCGCATCTGCCCCGCAG
TGGATGGGCACAGCTCCAGCGAGGACGCCGGCGCCTGCATGCACCTGGTGATCTGGAAGGTTCGAGA
dot-bracket secondary structure
...((((....(((((((.(((((.((...(((.((((((((((((...(((((((.(((((..(((.(((((.((((((.....)))))))))))...)
))...))).)).)))))))..))).))))))))).))).))..))))))))))))..))))......
SIMILARITIES| miRBase hsa-mir-1909: 8e-40 PMRD no hits microPC no hits | UniProt sp|Q8N1G1|REXO1_HUMAN: 0.0000004 RFAM no hits | most similar mature miRNAs |
Identical with: hsa-mir-1909 from miRBase (MNEST029191) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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