ABOUT THIS RECORDspecies: Drosophila melanogaster
miRNA family: miR-4028
source: miRNEST
Taxonomy by NCBI:
Drosophila melanogaster melanogaster subgroup melanogaster group Sophophora Drosophila Drosophiliti Drosophilina Drosophilini Drosophilinae Drosophilidae Ephydroidea Acalyptratae Schizophora Cyclorrhapha Eremoneura Muscomorpha Brachycera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTAATAATGTTGTTGTTGTAA miRNA* ACATCTTTAATAGTATTAGCC mismatches: 5 bulges: 0 |
pre-miRNA
CGCTACTTGTCTTAATAATGTTGTTGTTGTAATGTCATATCTTGCTAATGTCATGAACATTCTGTCTGGAATTCTTTTATAAATTACATCTTTAATAGTA
TTAGCCATTGCGGC
dot-bracket secondary structure
(((....((..((((((.(((((....((((((......(((.((.(((((.....)))))..))..)))............))))))....))))).))
)))).))..)))..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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CGCTACTTGTCTTAATAATGTTGTTGTTGTAATGTCATATCTTGCTAATGTCATGAACATTCTGTCTGGAATTCTTTTATAAATTACATCTTTAATAGTA
TTAGCCATTGCGGC
dot-bracket secondary structure
(((....((..((((((.(((((....((((((......(((.((.(((((.....)))))..))..)))............))))))....))))).))
)))).))..)))..
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
