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Species belonging to selected taxon:

Macaca fascicularis



ABOUT THIS RECORD

ID: MNEST007574
species: Macaca fascicularis
miRNA family: mir-621
source: miRNEST

Taxonomy by NCBI:
Macaca fascicularis Macaca Cercopithecinae Cercopithecidae Cercopithecoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTCTGGCAACAGCTCTTACCA

miRNA*
GTATAGTTGTAAGTTGGAAGC

mismatches: 4
bulges: 2

View larger
pre-miRNA
CATGAAACAACAAGCTTTTACCAACGTGCTATTCTGGCAACAGCTCTTACCAGTGCTCTTGAGGTGTACCCAAAGATTACACATCTTTCATTCAAAGAGA
GGATTTCTTGTCCAAGCTTTGTTATAGGACACTAGTAATTCCTGGAGGTATAGTTGTAAGTTGGAAGCAGGTAGGAAGTGGAATGGGTTTATTAGA


dot-bracket secondary structure
....((((..((..((.((.((.((.((((..((((((.((((((..((((.(((.((((..((.....)).)))).)))...(((((.....))))).(
(((.(((((((((.............)))))..)).)).))))...)))).))))))..)))))))))).)).)).)).))..)).))))......



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt sp|Q9Z142|TMM33_RAT: 0.00002

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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